Guide to producing a personalized mRNA cancer vaccine.

🧪 Pipeline for detecting Ψ modification

Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer

NAnostring quality Control dasHbOard.

Urgent need to bring the COVID-19 vaccine to mass production.

A simple, fast program which transcribes a DNA strand into messenger RNA (mRNA), which it then translates into amino acids.

An open platform which provides information about miRNAs and genes from different popular databases

Discriminant Analysis with Network PROcessing

mRNA Vaccine Degradation Prediction using Deep Learning

MSLCRN: a novel step-wise method for inferring module-specific lncRNA-mRNA causal regulatory network in human cancer

Open toolkit and benchmarks for sequence-first delivery and mRNA expression engineering.

SFold RNA tools

A simple, fast program which transcribes a DNA strand into messenger RNA (mRNA), which it then translates into amino acids, implemented in Rust.

Geneme-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism

mRNA extinction coefficient and concentration calculator

ASDmiR: a step-wise method to uncover miRNA regulation related to autism spectrum disorder

CPU-only validator for AI-predicted 3D RNA structures against experimental data (FRET, cryo-EM, SHAPE/DMS probing, designability, hydrolysis risk)

Simulation of DNA expression to proteins from any given or gererated DNA sequence

In silico methods for predicting miRNA sponge modules

🧬 Canine neoantigen prioritization pipeline — from somatic variants to ranked vaccine candidates, purpose-built for dogs