Data for Sharma et al. 2021, Automated Exploration of Prebiotic Chemical Reaction Space.
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Jan 16, 2022 - Jupyter Notebook
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prebiotic-chemistry
Here are 9 public repositories matching this topic...
Prebiotic synthesis of nucleoside analogues (BMSIS YSP 2021).
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Oct 1, 2023 - Jupyter Notebook
lifeSimulatoR is an R package for simulating simplified origin-of-life scenarios, including prebiotic chemistry, molecular replication, mutation, selection, and the emergence of complexity in evolving systems.
simulation information-theory computational-biology artificial-life r-package molecular-evolution r-programming educational-software r-project astrobiology complexity-science abiogenesis artificial-life-simulations protocells origin-of-life prebiotic-chemistry autocatalytic-networks
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Jun 20, 2026 - R
Reusable/automated Cantera workflow for testing which products are thermodynamically equilibrium-accessible from a given starting inventory.
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Jul 1, 2026 - Jupyter Notebook
Computational workflow for modeling amino acid formation in Titan’s Selk crater melt pools. Combines Gibbs free energy estimation, polynomial thermodynamic fits, and Cantera equilibrium simulations to study prebiotic chemistry relevant to astrobiology and the Dragonfly mission. Reproducibility dataset archived on Zenodo.
computational-chemistry thermodynamics titan cantera thermodynamics-models astrobiology prebiotic-chemistry
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Mar 5, 2026 - Jupyter Notebook
The Origin of Life
thermodynamics self-organization astrobiology entropy-production abiogenesis origin-of-life prebiotic-chemistry dissipative-structures autocatalytic-networks maximum-entropy-production
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Dec 26, 2025
Weighted Topological Analysis of HCN Polymerization - Identifying Prebiotic Bottlenecks and Autocatalytic Motifs
chemistry cheminformatics graph-theory topological-data-analysis graph-grammars djikstra-algorithm prebiotic-chemistry
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Mar 31, 2026 - Python
CDFD Part II: Origins of Life and Tri-Regime Bioenergetics
reproducible-research geochemistry bioenergetics cdfd abiogenesis photochemistry redox-chemistry protocells autocatalysis origins-of-life prebiotic-chemistry cdfd-runtime cdfl constraint-driven-flux-dynamics hydrothermal-vents iron-sulfur coacervates homochirality rna-world chemiosmosis
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Aug 25, 2026 - HTML
Python-based simulation of prebiotic molecules accumulation dynamics on early Earth.
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Aug 20, 2026 - Jupyter Notebook
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