Disease pathways in the human interactome
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Mar 20, 2018 - Python
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pathway-prediction
Here are 9 public repositories matching this topic...
Leveraging Heterogeneous Network Embedding for Metabolic Pathway Prediction
bioinformatics deep-learning metapath embedding pathway-prediction metacyc heterogeneous-information-networks biocyc pathway-tools
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Jul 8, 2021 - Python
Metabolic pathway inference using multi-label classification with rich pathway features
bioinformatics metagenomics logistic-regression multi-label-learning pathway-prediction metacyc biocyc pathway-tools
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Jul 6, 2023 - Python
Metabolic pathway inference using non-negative matrix factorization with community detection
bioinformatics community-detection metagenomics multi-label-classification metabolic-reconstruction non-negative-matrix-factorization multi-label-learning pathway-prediction metacyc metabolic-pathways subnetwork biocyc pathway2ec-association-matrix
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Sep 19, 2021 - Python
CHAP: Modeling Metabolic Pathways as Groups (with Augmentation)
bioinformatics metagenomics topic-modeling pathway-analysis metabolic-network metabolic-reconstruction pathway-prediction metacyc metabolic-pathways pathway-enrichment-analysis pathway-reconstruction biocyc pathway-tools
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Nov 8, 2021 - Python
Simple classifiers to predict to which metabolic pathway given compound belongs to.
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Jul 26, 2020 - Python
Predicting whether disease pathways are associated with Alzheimer's disease using data from UniProt, CheBi, KEGG and Reactome.
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Mar 29, 2026 - Python
Machine learning pipeline for predicting polymer degradation pathways from curated molecular descriptor data.
python portfolio data-science machine-learning cheminformatics pathway-prediction polymer-degradation
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Jun 22, 2026 - Python
This repositry features a DQN network for the pathway extraction in the process of prediction on which type of Anemia is the person suffering or not suffering Anemia at all. It is based on a Deep Reinforcement Learning based architecture and also has comparisons with state of the art Machine Learning Classifiers.
reinforcement-learning deep-reinforcement-learning healthcare dqn pathway-prediction disease-prediction anemia diagnosis-path medical-diagnosis-ai
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Dec 14, 2024 - Jupyter Notebook
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