A bioinformatics project demonstrating molecular docking of phytochemical compounds with the 1VFV protein. The workflow includes protein preparation, ligand preparation, molecular docking, and visualization of protein–ligand interactions using AutoDock4, AutoDockTools, Discovery Studio Visualizer, and AutoDock Vina

This pipeline implements competitive fragment recruitment to map metagenomic sequence space against a representative reference genome. In microbial ecology, read recruitment provides a quantitative window into the evolutionary dynamics of natural populations by measuring nucleotide-level polymorphism and consensus sequence divergence.