Common Workflow Language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).

An open source platform for managing and analyzing biomedical big data

Common Workflow Language reference implementation

Visual and code editor for Common Workflow Language

Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk

Python package to extend Airflow functionality with CWL1.1 support

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

REANA: Reusable research data analysis platform

An app store for scientific workflows, tools, notebooks, and services

The WES API is a standard way to run and manage portable workflows.

Python library for RO-Crate

CWL CommandLineTool descriptions for biology/life-sciences related applications

A library for generating an interactive SVG visualization of CWL workflows

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

A language server for Common Workflow Language

CWL on Kubernetes

Typescript data model for Common Workflow Language

A web application to view and share Common Workflow Language workflows