Scalable SQLite database for fast querying of gnomAD variant annotations (allele frequency, depth, population metrics). Supports gnomAD v2-v4, WGS and WES.
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Updated
Mar 8, 2026 - Python
Scalable SQLite database for fast querying of gnomAD variant annotations (allele frequency, depth, population metrics). Supports gnomAD v2-v4, WGS and WES.
Ancestry allele frequencies, LoF constraint, variant lists, and coverage from gnomAD, joined with ClinVar clinical significance - via MCP. STDIO or Streamable HTTP.
An open knowledge base for HLA matching, allele frequencies, haplotypes, and immunogenetics.
Site frequency spectrum of allele frequencies across a population, the workhorse summary of population genetics.
MCP server for gnomAD (Genome Aggregation Database): variant allele frequencies, gene constraint, coverage, structural and mitochondrial variants, and liftover — as typed tools for LLM agents.
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