Okada Lab
Laboratory for Cell Systems, Institute for Protein Research, Osaka University
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Showing 10 of 33 repositories
- context-dependent-GRNs Public Forked from Masaaaato/context-dependent-GRNs
This repository provides reproducible code for the study by Tsutsui M. et al. (2025), focused on constructing and analyzing context-aware gene regulatory networks (GRNs) derived from biomedical literature.
- Febri2026 Public
Ligand-dependent intracellular heterogeneity in cell cycle gene expression delays the G1/S entry
- BioMathForge Public Forked from Masaaaato/BioMathForge
BioMathForge is a comprehensive toolkit for generating, integrating, and analyzing biochemical reaction networks. It combines AI-powered reaction network generation with advanced pathway analysis to provide insights into biological systems.
- text2model-from-knowledge Public
Extending BioMASS to construct mathematical models from external knowledge (Arakane et al., 2024)
- cREscENDO Public
- HER2_Cellcycle Public
- Haga2023 Public
- periodontitis Public
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