Project Structure

Two folders:

• Fragpipe_data_analysis: personal Python data processing and analysis module for proteomic data from FragPipe. This module provides functionality for loading, cleaning, and analyzing data (both DDA and DIA). The module is not associated with the Fragpipe team.
• Astral_paper_publication_MCP: Individual scripts generating figures for the ASTRAL/FragPipe study. Each script imports and uses the Fragpipe_data_analysis module to create specific figures.