cdm-schema

KBase CDM schema in linkml format.

Website

https://kbase.github.io/cdm-schema

Repository Structure

Please note that the Pyspark data structures are the recommended way to create schema-compliant CDM classes.

• src/ - source files
  • cdm_schema
    • kbase_cdm_pydantic.py -- CDM schema as Pydantic classes
    • kbase_cdm_pyspark.py -- the schema as PySpark data structures
  • linkml -- LinkML schema source files

Developer Documentation

Use the make command to generate project artefacts:

• make gen-artefacts: generate the Pydantic, pyspark, and JSONschema versions of the schema

• make deploy: deploys site

Credits

This project was made with linkml-project-cookiecutter.