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garnish.affinity (v2.3.1) outputs only "NA" in the columns "affinity(nM)_netMHC" and "%Rank_netMHC" when with "HLA-B*55:01"

Status: Open.

#166 In andrewrech/antigen.garnish;

· Xiao-Zhong opened on Aug 26, 2025

How can set "mutant_index" for gene fusions and then run antigen.garnish?

Status: Open.

#165 In andrewrech/antigen.garnish;

· Xiao-Zhong opened on Jul 30, 2025

Interpretation of a dissimilarity score of zero

Status: Open.

#164 In andrewrech/antigen.garnish;

· kevinpryan opened on May 27, 2025

Error in the garnish_affinity step running in the docker image

Status: Open.

#163 In andrewrech/antigen.garnish;

· nagzz opened on Dec 18, 2024

Running the code given by developer as an example generates the error!

Status: Open.

#162 In andrewrech/antigen.garnish;

· Xiao-Zhong opened on Nov 17, 2024

Read my VCF file with an error.

Status: Open.

#161 In andrewrech/antigen.garnish;

· Xiao-Zhong opened on Oct 10, 2024

Error in library(rio) : there is no package called ‘rio’

Status: Open.

#160 In andrewrech/antigen.garnish;

· gr125 opened on Aug 23, 2024