#!/usr/bin/env python3 """ Generate a minimalist, advanced-tech GitHub profile README.

Usage: python generate_readme.py # writes README.md python generate_readme.py --live # also pulls live GitHub stats

No third-party packages required (standard library only). """

from future import annotations

import argparse import json import urllib.request from dataclasses import dataclass, field

@dataclass class Config: name: str = "Your Name" username: str = "your-username" # GitHub handle tagline: str = "Clinical Informatics · Healthcare ML · Data Engineering" subtitle: str = "Turning clinical data into systems that move patients through care faster."

about: str = (
    "I build data tools at the point of care — patient-recall dashboards, "
    "prior-authorization and scheduling automation over the drchrono EHR API, "
    "and ML models on real clinical datasets. MS in Clinical Informatics; "
    "background spanning applied ML, multi-omics, and computer vision."
)

highlights: list[str] = field(default_factory=lambda: [
    "Currently: clinical informatics @ Downtown Pain Physicians",
    "Focus: EHR data pipelines · predictive modeling · workflow automation",
    "Ask me about: FHIR/EHR integration, clinical ML, healthcare data ops",
])

# label -> URL
socials: dict[str, str] = field(default_factory=lambda: {
    "Portfolio": "https://your-site.com",
    "LinkedIn":  "https://linkedin.com/in/your-handle",
    "Email":     "mailto:you@email.com",
})

# (label, shields.io logo slug)
tech: list[tuple[str, str]] = field(default_factory=lambda: [
    ("Python", "python"),
    ("SQL", "postgresql"),
    ("PyTorch", "pytorch"),
    ("scikit-learn", "scikit-learn"),
    ("XGBoost", "xgboost"),
    ("Pandas", "pandas"),
    ("Streamlit", "streamlit"),
    ("FHIR", "hl7"),
    ("Docker", "docker"),
    ("Git", "git"),
])

# (name, url, one-line description)
projects: list[tuple[str, str, str]] = field(default_factory=lambda: [
    ("trauma_mortality_prediction",
     "https://github.com/your-username/trauma_mortality_prediction",
     "XGBoost model with a Streamlit interface for trauma mortality risk."),
    ("Deep-cc",
     "https://github.com/your-username/Deep-cc",
     "Multi-omics GAN / VAE / GCN pipeline for pancreatic cancer subtype classification."),
])

badge_color: str = "000000"   # hex without '#'. Try "" (empty) for brand colors.
show_stats: bool = True       # append github-readme-stats cards

def social_badges(cfg: Config) -> str: logos = {"portfolio": ("github", "000000"), "linkedin": ("linkedin", "0A66C2"), "email": ("gmail", "EA4335")} parts = [] for label, url in cfg.socials.items(): logo, color = logos.get(label.lower(), ("link", "555555")) badge = (f"https://img.shields.io/badge/{label}-{color}" f"?style=flat-square&logo={logo}&logoColor=white") parts.append(f"") return "\n".join(parts)

def tech_badges(cfg: Config) -> str: parts = [] for label, slug in cfg.tech: safe = label.replace("-", "--").replace(" ", "%20") color = cfg.badge_color if cfg.badge_color else "555555" badge = (f"https://img.shields.io/badge/{safe}-{color}" f"?style=flat-square&logo={slug}&logoColor=white") parts.append(f"") return "\n".join(parts)

def project_lines(cfg: Config) -> str: return "\n\n".join( f"{name} — {desc}" for name, url, desc in cfg.projects )

def stats_block(cfg: Config) -> str: if not cfg.show_stats: return "" u = cfg.username return ( '

\n\n' f'\n' f'\n\n' '

def fetch_live(cfg: Config) -> str: """Optional: pull public profile numbers from the GitHub API.""" try: req = urllib.request.Request( f"https://api.github.com/users/{cfg.username}", headers={"User-Agent": "readme-generator"}, ) with urllib.request.urlopen(req, timeout=10) as r: data = json.load(r) return (f"_{{data.get('public_repos', 0)} repos · " f"{data.get('followers', 0)} followers}") except Exception as e: # noqa: BLE001 print(f" (live fetch skipped: {e})") return ""

def build_readme(cfg: Config, live: bool = False) -> str: live_line = f"\n\n{fetch_live(cfg)}" if live else "" return f"""

{cfg.about}

{chr(10).join('- ' + h for h in cfg.highlights)}

{tech_badges(cfg)}

{project_lines(cfg)}

{stats_block(cfg)} """

def main() -> None: parser = argparse.ArgumentParser(description="Generate a GitHub profile README.") parser.add_argument("--live", action="store_true", help="pull live public stats from the GitHub API") parser.add_argument("-o", "--out", default="README.md", help="output path") args = parser.parse_args()

cfg = Config()
readme = build_readme(cfg, live=args.live)

with open(args.out, "w", encoding="utf-8") as f:
    f.write(readme)

print(f"Wrote {args.out} ({len(readme)} chars)")

if name == "main": main()