Some tutorial notebooks for programmatic use of the EBRAINS human brain atlas with siibra-python. Since siibra-python is under active development, these tutorials are regularly updated and typically point to specifice development snapshots of the library.
| Tutorial | About | Link |
|---|---|---|
| 1 | Basic Concepts of reference spaces, brain parcellations, maps and regions |  lab.ebrains.eu |
| 2 | Retrieving multimodal data features for brain regions | lab.ebrains.eu |
| 3 | Probabilistic assignment of regions to coordinates | lab.ebrains.eu |
| 4 | Differential Gene Expression Analysis | lab.ebrains.eu |
| 5 | Combined Workflow | lab.ebrains.eu |
| 6 | Cortical patch sampling | lab.ebrains.eu |
| a | OHBM 2023 example | lab.ebrains.eu |
| b | HIBALL Winterschool 2023 | lab.ebrains.eu |
| c | BigBrain Workshop 2023 | lab.ebrains.eu |
| d | IBM9345 2024 | lab.ebrains.eu |
| e | siibra-overview | lab.ebrains.eu colab.research.google.com |
| f | Using your data in siibra | lab.ebrains.eu colab.research.google.com |