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diffatac fails for hs1_chrR: T2T TxDb sqlite not found in baser container
generated-by-AIContent generated with AI assistanceContent generated with AI assistanceStatus: Open.#126聽In CCBR/ASPEN;diffatac fails for hs1_chrR: object 'roiAnnodf' not found in DESeq2.Rmd
ASPENRepoNameRepoNamegenerated-by-AIContent generated with AI assistanceContent generated with AI assistanceStatus: Open.#125聽In CCBR/ASPEN;- Status: Open.#124聽In CCBR/ASPEN;
fix: add hs1/hs1_chrR TxDb support to R annotation scripts (ccbr_annotate_bed.R, ccbr_annotate_peaks.R)
ASPENRepoNameRepoNamebugSomething isn't workingSomething isn't workingenhancementNew feature or requestNew feature or requestStatus: Open.#123聽In CCBR/ASPEN;fix: ZeroDivisionError in _ccbr_counts2density.py when flanking TSS bins have zero reads
ASPENRepoNameRepoNamebugSomething isn't workingSomething isn't workingStatus: Open.#122聽In CCBR/ASPEN;feat: port CARLISLE logging and aesthetic improvements to aspen CLI script
ASPENRepoNameRepoNameenhancementNew feature or requestNew feature or requestStatus: Open.#118聽In CCBR/ASPEN;feat: add hs1_chrR as a supported reference genome
ASPENRepoNameRepoNameenhancementNew feature or requestNew feature or requestStatus: Open.#117聽In CCBR/ASPEN;Increase walltime for below steps
ASPENRepoNameRepoNamebugSomething isn't workingSomething isn't workingStatus: Open.Increase lscratch allocation for RemoveBL
ASPENRepoNameRepoNamebugSomething isn't workingSomething isn't workingStatus: Open.Reduce RAM & increase walltime for trimming step
ASPENRepoNameRepoNamebugSomething isn't workingSomething isn't workingStatus: Open.Add support for GRCm39
ASPENRepoNameRepoNameenhancementNew feature or requestNew feature or requestStatus: Open.clarify replicateName: biological or technical
ASPENRepoNameRepoNamedocumentationImprovements or additions to documentationImprovements or additions to documentationStatus: Open.