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chore: slim DiffBio runtime dependencies
DiffBio CI
#47:
Pull request
#3
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chore/slim-runtime-dependencies
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Refresh uv.lock to clear known vulnerabilities
DiffBio CI
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DiffBio Build Verification
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Install CI environments from uv.lock
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Add a security policy and three issue templates
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#43:
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Ignore private working notes and assistant configuration
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docs: rewrite the README status notice and fix the opifex URL casing
DiffBio CI
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docs: rewrite the README status notice and fix the opifex URL casing
DiffBio Build Verification
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docs(paper): add gain-vs-gene-budget figure and computational-cost table
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docs(paper): add gain-vs-gene-budget figure and computational-cost table
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test(normalization): skip the scanpy-parity test when scanpy is absent
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test(normalization): skip the scanpy-parity test when scanpy is absent
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docs(paper): add leakage and overfitting audit, data splits, reproduc…
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docs(paper): add leakage and overfitting audit, data splits, reproduc…
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docs(paper): demonstrate trainable and orthonormal reduction bases
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docs(paper): demonstrate trainable and orthonormal reduction bases
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docs: DiffBio manuscript on jointly optimized preprocessing
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docs: DiffBio manuscript on jointly optimized preprocessing
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