Merge branch 'develop' #55
Workflow file for this run
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| name: Run tests of pyoma | |
| on: | |
| push: | |
| pull_request: | |
| branches: [ $default-branch ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{matrix.python-version}} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pytest | |
| pip install .[create_db,enrichment] | |
| - name: Download test database | |
| run: | | |
| curl -L --fail https://zenodo.org/records/20310433/files/TestDb.h5?download=1 -o tests/browser/TestDb.h5 | |
| curl -L --fail https://zenodo.org/records/20310433/files/TestDb.h5.idx?download=1 -o tests/browser/TestDb.h5.idx | |
| ls -l tests/browser/TestDb.h5* | |
| - name: Check versions of installed libraries/systems | |
| run: python -c "import sys, tables; print(sys.version); tables.print_versions()" | |
| - name: Test with pytest | |
| run: | | |
| pytest |